cmpmi

R/python codes for mucosal immunology paper "Commensal microbiota drive the functional diversification of colon macrophages" https://www.nature.com/articles/s41385-019-0228-3

packages used and links:

Seurat2.0 (https://satijalab.org/seurat/); Monocle2 (http://cole-trapnell-lab.github.io/monocle-release/); SCENIC R (https://github.com/aertslab/SCENIC)

contact info:

Byunghyun Kang danjong99@gmail.com; byunghyun.kang@nih.gov