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dshree-biocodeai/README.md

Hi, I’m Dhanashree 👋

I’m currently upskilling by working on

  • Hands-on bioinformatics projects, including minimal NGS pipelines (QC → alignment → variant calling, RNA-seq), and genomic/clinical data analysis & interpretation.

I’m actively learning

  • NGS data analysis and genomics workflows using Python, R, and Linux, along with SQL and applied AI/ML concepts.

I’m open to collaborating on

  • Beginner-to-intermediate Bioinformatics and genomics data analysis projects, clinical/healthcare analytics, or research-oriented learning initiatives.

I’m looking for help with

  • Best practices in genomics pipelines, variant interpretation, and learning & improving reproducibility in bioinformatics workflows.

PS: I enjoy constant learning through practical projects and turning complex biological data into meaningful insights.

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  1. TNBC-Variant-Pipeline TNBC-Variant-Pipeline Public

    Automated GATK4 variant discovery pipeline for Triple-Negative Breast Cancer (TNBC) genomic analysis. Identifies high-impact clinical mutations using BWA-MEM, HaplotypeCaller, and Funcotator.

    Shell

  2. xist-breastcancer-biomarker-analysis xist-breastcancer-biomarker-analysis Public

    Multi-omics bioinformatics study investigating XIST as a potential biomarker in breast cancer.