v1.1.2

Changes in v1.1.2

• uORF if statement to evaluate empty
• fix TX ID case matching
• unittest implemented
• json configs fix vals

Full Changelog: v1.1.1...v1.1.2

v1.1.1

Changes in v1.1.1

Improved: support for transcript feature types in GFF3 input (e.g. mRNA, ncRNA) by treating transcript-like features consistently during processing

Added: early validation of sequence identifier (seqid/contig) compatibility between the annotation and reference FASTA, with informative error messages and logging when mismatches are detected

Full changelog:
v1.1.0...v1.1.1

v1.1.0

Changes in v1.1.0

Added: prediction and annotation of upstream open reading frames (uORFs)

Added: explicit annotation of 5′ and 3′ untranslated regions (UTRs)

Improved: runtime performance and scalability for large transcript annotations

Improved: robust parsing and processing of GFF3-formatted input files

Full changelog: v1.0.0...v1.1.0

v1.0.0

update directory structure