Search results

Faile to create gtf file

Status: Open.

#19 In fw262/TAR-scRNA-seq;

· DjHawkShepherd opened on Apr 23, 2025

uTAR-aTAR read alignment ratio

Status: Open.

#18 In fw262/TAR-scRNA-seq;

· Prakrithi-P opened on Aug 28, 2024

Is there any way to run the pipeline faster?

Status: Open.

#14 In fw262/TAR-scRNA-seq;

· genecell opened on Jul 15, 2022

Error in rule MergeBamAlignment

Status: Open.

#13 In fw262/TAR-scRNA-seq;

· HUPINLI opened on Feb 17, 2022

Availability of matrices utilized in the manuscript?

Status: Open.

#12 In fw262/TAR-scRNA-seq;

· diegoalexespi opened on Feb 8, 2022

Applicability of from_cellranger codes on 10X Visium ST-Seq bams

Status: Open.

#11 In fw262/TAR-scRNA-seq;

· Prakrithi-P opened on Oct 23, 2021

fail to create scTAR_cellranger env

Status: Open.

#10 In fw262/TAR-scRNA-seq;

· adonatiucsd opened on Oct 5, 2021

Error creating DigitalExpression and previous bam files are returned empty

Status: Open.

#9 In fw262/TAR-scRNA-seq;

· Prakrithi-P opened on Sep 12, 2021

Processing TAR-scRNA-seq outputs

Status: Open.

#8 In fw262/TAR-scRNA-seq;

· dkeitley opened on Jun 10, 2021