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--query not functioning properly

Status: Open.

#82 In fwhelan/coinfinder;

· JavierFFavieres opened on Jan 28, 2026

Error: package or namespace load failed for ‘phytools’

Status: Open.

#81 In fwhelan/coinfinder;

· djfeistel opened on Jul 22, 2025

Output all pairs

Status: Open.

#80 In fwhelan/coinfinder;

· annecmg opened on Jun 8, 2025

Coinfinder takes very long in plotting step

Status: Open.

#79 In fwhelan/coinfinder;

· annecmg opened on Apr 7, 2025

Error Encountered with Coinfinder Output Files

Status: Open.

#78 In fwhelan/coinfinder;

· redlou-del opened on Oct 18, 2024

More than one value for the 'permit_filter' setting has been specified.

Status: Open.

#77 In fwhelan/coinfinder;

· kenken86 opened on Aug 21, 2024

"Line 7 did not have 2 elements" Error

Status: Open.

#71 In fwhelan/coinfinder;

· jack-d-barber opened on Nov 13, 2023

Presence and Absence File Error

enhancementNew feature or requestNew feature or request

Status: Open.

#70 In fwhelan/coinfinder;

· pthieringer opened on Nov 2, 2023

deal with panaroo data better

Status: Open.

#69 In fwhelan/coinfinder;

· fwhelan opened on Oct 23, 2023

missing R packages in installation instructions

enhancementNew feature or requestNew feature or request

Status: Open.

#16 In fwhelan/coinfinder;

· slhogle opened on Jan 27, 2020

Feature request: Parsing OrthoFinder output

enhancementNew feature or requestNew feature or request

Status: Open.

#9 In fwhelan/coinfinder;

· paschalis51d opened on Nov 30, 2019