Add GPU-accelerated Transit Least Squares (TLS)#55

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johnh2o2 wants to merge 106 commits intomasterfrom

tls-gpu-implementation

Commits on Oct 9, 2025

Commits on Oct 10, 2025

Merge pull request #38 from xiaziyna/copilot/add-nufft-lrt-feature
johnh2o2
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Commits on Oct 14, 2025

Initial plan
Copilot
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Add comprehensive PyCUDA technology assessment and findings

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johnh2o2
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Add getting started guide and visual summary for assessment

Copilot
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Add comprehensive index for all assessment documents

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Phase 1: Drop Python 2.7 support and modernize codebase

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Phase 2: Add CI/CD, documentation, and version bump to 0.4.0

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Add comprehensive migration guide and documentation index

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Make changes compatible with v1.0 base branch

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Commits on Oct 17, 2025

Commits on Oct 25, 2025

Improve sparse BLS implementation and add RunPod development support

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John Hoffman
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Add GPU-accelerated sparse BLS implementation

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Update scripts/sync-to-runpod.sh

johnh2o2
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Copilot
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Update scripts/test-remote.sh

johnh2o2
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Copilot
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Update scripts/setup-remote.sh

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Copilot
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Merge pull request #45 from johnh2o2/fix/sparse-bls-wrapped-transits
johnh2o2
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Merge branch 'v1.0' into feature/sparse-bls-gpu

John Hoffman
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John Hoffman
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Update minimum Python version from 3.7 to 3.8

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Update cuvarbase/kernels/sparse_bls_simple.cu

johnh2o2
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Copilot
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Update cuvarbase/kernels/sparse_bls_simple.cu

johnh2o2
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Copilot
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Update cuvarbase/kernels/sparse_bls.cu

johnh2o2
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Copilot
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Update cuvarbase/kernels/sparse_bls.cu

johnh2o2
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Copilot
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Update cuvarbase/bls.py

johnh2o2
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Copilot
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Merge pull request #46 from johnh2o2/feature/sparse-bls-gpu
johnh2o2
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Add comprehensive algorithm benchmarking suite

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John Hoffman
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Add persistent benchmark runner and time estimator

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Add example benchmark results showing 315x speedup

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Add comprehensive TESS catalog BLS cost analysis

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WIP: BLS kernel optimization - baseline and analysis

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Add optimized BLS kernel with bank conflict fixes and warp shuffles

John Hoffman
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John Hoffman
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Fix warp shuffle reduction bug in optimized BLS kernel

John Hoffman
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John Hoffman
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Complete BLS kernel optimization work with results documentation

John Hoffman
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John Hoffman
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Add adaptive BLS with dynamic block sizing

John Hoffman
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John Hoffman
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Add realistic batch Keplerian BLS benchmark

John Hoffman
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John Hoffman
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Complete adaptive BLS implementation with dramatic results

John Hoffman
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John Hoffman
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Add baseline verification script

John Hoffman
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John Hoffman
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Add GPU utilization analysis and architecture comparison

John Hoffman
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Add comprehensive PR summary

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John Hoffman
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Fix adaptive benchmark to use Keplerian frequency grids

John Hoffman
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John Hoffman
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Update PR summary to reflect Keplerian grids

John Hoffman
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John Hoffman
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Add thread-safety and LRU eviction to kernel cache

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John Hoffman
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Update PR summary with code quality improvements

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John Hoffman
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Add comprehensive documentation for code quality fixes

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John Hoffman
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Remove PR_SUMMARY.md (moved to GitHub PR description)

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John Hoffman
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Commits on Oct 26, 2025

Merge pull request #47 from johnh2o2/feature/benchmark-suite
johnh2o2
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Merge pull request #49 from johnh2o2/feature/optimize-bls-kernel
johnh2o2
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Improve README: highlight BLS optimization and credit Jamila Taaki

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John Hoffman
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Correct sparse BLS citation and remove cost implications

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John Hoffman
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Merge pull request #50 from johnh2o2/readme-improvements
johnh2o2
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Enable GPU sparse BLS by default in eebls_transit

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John Hoffman
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Update cuvarbase/bls.py

johnh2o2
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Copilot
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Update cuvarbase/bls.py

johnh2o2
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Copilot
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Merge pull request #51 from johnh2o2/sparse-bls-gpu-default
johnh2o2
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Commits on Oct 27, 2025

Repository cleanup: consolidate docs and organize tests

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John Hoffman
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Move JSON files to analysis/ and remove cleanup history doc

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John Hoffman
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Merge pull request #52 from johnh2o2/repository-cleanup
johnh2o2
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Phase 1: TLS GPU implementation - Core infrastructure

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Phase 2: TLS GPU optimization - Advanced features

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Phase 3: TLS production features - Statistics & usability

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Fix TLS GPU kernel compilation and add GPU test script

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Document RunPod GPU testing issues and solutions

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Fix period grid generation in tls_grids.py

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Fix critical Ofir period grid generation bugs

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Fix critical TLS GPU bugs: Ofir grid, duration scaling, and Thrust sorting

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Consolidate TLS to single performant kernel

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Add Keplerian-aware duration constraints for TLS

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John Hoffman
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Wire up Keplerian TLS Python API

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Add PR description markdown file for easy copying

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Clean up TLS test files and update README

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Reorganize TLS documentation and test files

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John Hoffman
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Update cuvarbase/tls_models.py

johnh2o2
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Copilot
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Address PR review comments for TLS implementation

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John Hoffman
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Replace insertion sort with bitonic sort for scalability

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John Hoffman
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Commits on Feb 7, 2026

Fix TLS to use limb-darkened transit template instead of box model

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John Hoffman
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Add automated RunPod pod lifecycle scripts

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