Skip to content

chore(deps): Update tifffile requirement from >=2023.0 to >=2026.3.3#27

Open
dependabot[bot] wants to merge 1 commit intomainfrom
dependabot/pip/tifffile-gte-2026.3.3
Open

chore(deps): Update tifffile requirement from >=2023.0 to >=2026.3.3#27
dependabot[bot] wants to merge 1 commit intomainfrom
dependabot/pip/tifffile-gte-2026.3.3

Conversation

@dependabot
Copy link
Copy Markdown

@dependabot dependabot bot commented on behalf of github Apr 11, 2026

Updates the requirements on tifffile to permit the latest version.

Release notes

Sourced from tifffile's releases.

v2026.3.3

Read and write TIFF files

Tifffile is a comprehensive Python library to

  1. store NumPy arrays in TIFF (Tagged Image File Format) files, and
  2. read image and metadata from TIFF-like files used in bioimaging.

Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, GeoTIFF, Adobe DNG, ZIF (Zoomable Image File Format), MetaMorph STK, Zeiss LSM, ImageJ hyperstack, Micro-Manager MMStack and NDTiff, SGI, NIHImage, Olympus FluoView and SIS, ScanImage, Molecular Dynamics GEL, Aperio SVS, Leica SCN, Roche BIF, PerkinElmer QPTIFF (QPI, PKI), Hamamatsu NDPI, Argos AVS, Philips DP, and ThermoFisher EER formatted files.

Image data can be read as NumPy arrays or Zarr arrays/groups from strips, tiles, pages (IFDs), SubIFDs, higher order series, and pyramidal levels.

Image data can be written to TIFF, BigTIFF, OME-TIFF, and ImageJ hyperstack compatible files in multi-page, volumetric, pyramidal, memory-mappable, tiled, predicted, or compressed form.

Many compression and predictor schemes are supported via the imagecodecs library, including LZW, PackBits, Deflate, CCITT, PIXTIFF, LZMA, LERC, Zstd, JPEG (8 and 12-bit, lossless), JPEG 2000, JPEG XR, JPEG XL, WebP, PNG, EER, Jetraw, 24-bit floating-point, and horizontal differencing.

Tifffile can also be used to inspect TIFF structures, read image data from multi-dimensional file sequences, write fsspec ReferenceFileSystem for TIFF files and image file sequences, patch TIFF tag values, and parse many proprietary metadata formats.

Changes

  • Do not convert TVIPS pixel sizes to m (#319).
  • Support writing packed integers with imagecodecs > 2026.1.14.
  • Support reading ccitt compressed images with imagecodecs > 2026.1.14.
Changelog

Sourced from tifffile's changelog.

2026.3.3

  • Pass 5137 tests.
  • Do not convert TVIPS pixel sizes to m (#319).
  • Support writing packed integers with imagecodecs > 2026.1.14.
  • Support reading ccitt compressed images with imagecodecs > 2026.1.14.

2026.2.24

  • Remove deprecated TiffPages.pages and FileSequence.files (breaking).
  • Remove stripnull, stripascii, and bytestr functions (breaking).
  • Rewrite command line interfaces (breaking).
  • Support Experimenter and Project elements in OmeXml.
  • Refactor TiffPages.
  • Fix code review issues.

2026.2.20

  • Fix rounding of high resolutions (#318).
  • Fix code review issues.

2026.2.16

  • Optimize reading multi-file pyramidal OME TIFF files.

2026.2.15

  • Support reading multi-file pyramidal OME TIFF files (image.sc/t/119259).

2026.1.28

  • Deprecate colormaped parameter in imagej_description (use colormapped).
  • Fix code review issues.

2026.1.14

  • Improve code quality.

2025.12.20

  • Do not initialize output arrays.

2025.12.12

  • Improve code quality.

2025.10.16

  • Add option to decode EER super-resolution sub-pixels (breaking, #313).
  • Parse EER metadata to dict (breaking).

... (truncated)

Commits

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR:

  • @dependabot rebase will rebase this PR
  • @dependabot recreate will recreate this PR, overwriting any edits that have been made to it
  • @dependabot show <dependency name> ignore conditions will show all of the ignore conditions of the specified dependency
  • @dependabot ignore this major version will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself)
  • @dependabot ignore this minor version will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself)
  • @dependabot ignore this dependency will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)

Updates the requirements on [tifffile](https://github.com/cgohlke/tifffile) to permit the latest version.
- [Release notes](https://github.com/cgohlke/tifffile/releases)
- [Changelog](https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst)
- [Commits](cgohlke/tifffile@v2023.1.23...v2026.3.3)

---
updated-dependencies:
- dependency-name: tifffile
  dependency-version: 2026.3.3
  dependency-type: direct:development
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update python code labels Apr 11, 2026
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

dependencies Pull requests that update a dependency file python Pull requests that update python code

Projects

None yet

Development

Successfully merging this pull request may close these issues.

0 participants