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initial claude setup#269

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AlexanderFengler merged 5 commits intomainfrom
initial-claude-setup
Mar 30, 2026
Merged

initial claude setup#269
AlexanderFengler merged 5 commits intomainfrom
initial-claude-setup

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This pull request adds comprehensive project context and enforces best practices for Python package management in the repository. The main changes include introducing a detailed project overview in CLAUDE.md and establishing rules to require the use of uv for all Python operations.

Project documentation and context:

  • Added CLAUDE.md with an in-depth overview of the ssm-simulators project, including its purpose, structure, build system, key commands, architecture patterns, conventions, and CI workflows. This serves as a foundational reference for contributors and integrators.

Python package management enforcement:

  • Introduced .claude/rules/uv.md to mandate the use of uv as the package manager for all Python operations, disallowing direct use of pip install and requiring dependency management via uv sync. This ensures consistency and reproducibility across development environments.

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codecov bot commented Mar 28, 2026

Codecov Report

❌ Patch coverage is 98.00000% with 1 line in your changes missing coverage. Please review.

Files with missing lines Patch % Lines
ssms/hssm_support.py 75.00% 1 Missing ⚠️
Flag Coverage Δ
unittests 92.38% <98.00%> (+0.94%) ⬆️

Flags with carried forward coverage won't be shown. Click here to find out more.

Files with missing lines Coverage Δ
ssms/basic_simulators/boundary_functions.py 88.00% <100.00%> (+0.50%) ⬆️
ssms/basic_simulators/drift_functions.py 94.11% <100.00%> (+0.36%) ⬆️
ssms/basic_simulators/simulator.py 89.42% <100.00%> (+7.73%) ⬆️
ssms/cli/generate.py 96.96% <100.00%> (+0.04%) ⬆️
ssms/config/boundary_registry.py 100.00% <100.00%> (ø)
ssms/config/drift_registry.py 100.00% <100.00%> (ø)
ssms/config/model_config_builder.py 93.33% <100.00%> (+0.13%) ⬆️
..._generators/likelihood_estimators/kde_estimator.py 100.00% <100.00%> (ø)
...aset_generators/parameter_samplers/base_sampler.py 92.95% <100.00%> (ø)
ssms/dataset_generators/protocols.py 100.00% <ø> (ø)
... and 3 more
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AlexanderFengler and others added 4 commits March 29, 2026 16:07
Cover the new type-narrowing branches introduced by the mypy alignment:
- bin_simulator_output_pointwise: None check, dict input handling
- LogKDE.kde_sample: ndarray, list, and float alternate_choice_p branches

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Remove uv.lock from .gitignore and commit the lockfile for reproducible
dev/CI environments. Raise check-added-large-files limit to 1000 KB.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Match GitHub's own 100 MB hard limit rather than imposing an artificial
lower threshold. Notebooks and lock files should not be blocked.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
@AlexanderFengler AlexanderFengler merged commit 5c51652 into main Mar 30, 2026
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