Use meryl ploidy instead of kmerHistToPloidyDepth.jar in filtering#176
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ASLeonard wants to merge 1 commit into
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Use meryl ploidy instead of kmerHistToPloidyDepth.jar in filtering#176ASLeonard wants to merge 1 commit into
meryl ploidy instead of kmerHistToPloidyDepth.jar in filtering#176ASLeonard wants to merge 1 commit into
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meryl ploidy is also in meryl v1.4.1, and removes an extra dependency
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This requires marbl/meryl@0fc8020, but the meryl shipped in canu is one commit ahead (marbl/meryl@345c69a), so might already be in the |
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meryl ploidy is also in meryl v1.4.1, and removes the java/jar dependency.
The ploidy output is like
so we now filt based on the ceil of the noise-trough since
meryl greater-thanonly takes integer thresholds