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  • Allen Institute
  • Seattle, WA

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  1. AllenNeuralDynamics/neuroglancer-chat AllenNeuralDynamics/neuroglancer-chat Public

    An agent interface for neuroglancer. Navigate and annotate brain imaging data with natural language

    Python 1

  2. AllenNeuralDynamics/see-spot AllenNeuralDynamics/see-spot Public

    QC evaluation framework for HCR (spatial transcriptomics) spot intensity data from ophys-mfish projects. Interactive dashboard connected to Neuroglancer (javascript/python/Apache ECharts)

    Python

  3. AllenNeuralDynamics/aind-hcr-qc AllenNeuralDynamics/aind-hcr-qc Public

    Code to generate QC plots for HCR data

    Jupyter Notebook

  4. twitter_algo_bias_challenge twitter_algo_bias_challenge Public

    Discovery of language/script bias in Twitter's image cropping saliency model

    Jupyter Notebook

  5. AllenNeuralDynamics/aind-hcr-data-loader AllenNeuralDynamics/aind-hcr-data-loader Public

    Data loading for AIND HCR datasets (v1.0)

    Jupyter Notebook

  6. hcr-stich hcr-stich Public

    generate hcr stitch qc

    Jupyter Notebook