Normalize line endings and fix package list parsing for Windows compatibility

.gitattributes

@@ -0,0 +1,14 @@
+# Set default line endings to LF for all text files
+* text=auto eol=lf
+
+# Explicitly set LF for specific file types
+*.sh text eol=lf
+Dockerfile text eol=lf
+*.py text eol=lf
+*.jinja text eol=lf
+*.tex text eol=lf
+*.cls text eol=lf
+*.yaml text eol=lf
+*.bib text eol=lf
+*.md text eol=lf
+.gitignore text eol=lf

.gitignore

@@ -1,2 +1,3 @@
 output/
-.DS_Store
+.DS_Store
+.env

README.md

@@ -80,6 +80,11 @@ Start a Docker container with the image you just built. This will launch an inte
 $ docker run -it -v $(pwd):/workdir cv-tools
 ```
 
+for windows systems:
+```bash
+$ docker run -it -v $(pwd -W):/workdir cv-tools
+```
+
 The `-v $(pwd):/workdir` option mounts your local cv-tools directory to the `/workdir` directory inside the container.
 
 ### Method 2: From Source with Manual Installation

run.sh

@@ -64,7 +64,7 @@ check_latex_package() {
 check_latex_packages_from_file() {
     local package_file="$1"
     while IFS= read -r package || [ -n "$package" ]; do
-        package=$(echo "$package" | xargs)  # Trim any surrounding whitespace
+        package=$(echo "$package" | tr -d '\r' | xargs)  # Trim whitespace and strip CR
         if [ -n "$package" ]; then
             check_latex_package "$package"
         fi