make CLI startup faster

[mashehu]

No description provided.

[codecov]

Codecov Report

❌ Patch coverage is 71.11717% with 106 lines in your changes missing coverage. Please review.
✅ Project coverage is 78.18%. Comparing base (b2493f5) to head (86a5bdf).

Files with missing lines	Patch %	Lines
nf_core/__main__.py	29.68%	45 Missing ⚠️
nf_core/github_api.py	66.37%	38 Missing ⚠️
nf_core/pydantic_models.py	95.62%	6 Missing ⚠️
nf_core/pipelines/download/singularity.py	28.57%	5 Missing ⚠️
nf_core/version_updater.py	82.60%	4 Missing ⚠️
nf_core/commands_test_datasets.py	0.00%	3 Missing ⚠️
nf_core/synced_repo.py	57.14%	3 Missing ⚠️
nf_core/commands_pipelines.py	0.00%	1 Missing ⚠️
nf_core/pipelines/list.py	66.66%	1 Missing ⚠️

☔ View full report in Codecov by Harness.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:

• ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

[codspeed-hq]

Merging this PR will improve performance by ×4.3

⚡ 9 improved benchmarks

Performance Changes

	Mode	Benchmark	BASE	HEAD	Efficiency
⚡	WallTime	test_import_main_startup	3,030.5 ms	385.8 ms	×7.9
⚡	WallTime	test_cli_command_group_help_startup[test-datasets]	3,076.3 ms	452.6 ms	×6.8
⚡	WallTime	test_cli_help_startup	3,083.8 ms	462.6 ms	×6.7
⚡	WallTime	test_cli_command_group_help_startup[pipelines]	3,084.4 ms	465.9 ms	×6.6
⚡	WallTime	test_cli_command_group_help_startup[subworkflows]	3,090.9 ms	469.1 ms	×6.6
⚡	WallTime	test_cli_command_group_help_startup[modules]	3,097.9 ms	472.9 ms	×6.6
⚡	WallTime	test_pipelines_schema_lint_startup	3.2 s	1 s	×3.1
⚡	WallTime	test_pipelines_create_startup	3.3 s	2.6 s	+27.19%
⚡	WallTime	test_modules_install_startup	8.3 s	7.1 s	+17.67%

Tip

Curious why this is faster? Comment @codspeedbot explain why this is faster on this PR, or directly use the CodSpeed MCP with your agent.

---

_{Comparing mashehu:faster-cli (86a5bdf) with dev (b2493f5)}

[maxulysse]

I trust you