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    • Aird-SDK

      Public
      Support for Java, C#, Python
      Java
      Mulan Permissive Software License, Version 2
      01711Updated Dec 7, 2025Dec 7, 2025
    • AirdPro

      Public
      Aird format Conversion Client for Verdor File Conversion
      JavaScript
      Mulan Permissive Software License, Version 2
      01800Updated Dec 1, 2025Dec 1, 2025
    • mzmine3

      Public
      MZmine 3 source code repository
      Java
      MIT License
      162000Updated Aug 19, 2025Aug 19, 2025
    • HTML
      0000Updated Jun 9, 2025Jun 9, 2025
    • Laboratory Intelligence Center 实验室情报管理系统
      Java
      0000Updated Jan 8, 2025Jan 8, 2025
    • MSIcon

      Public
      Visual design of knowledge map for mass spectrometry
      TypeScript
      Apache License 2.0
      0000Updated Jul 17, 2024Jul 17, 2024
    • pwiz

      Public
      The ProteoWizard Library is a set of software libraries and tools for rapid development of mass spectrometry and proteomic data analysis software.
      C#
      Apache License 2.0
      116000Updated Mar 12, 2024Mar 12, 2024
    • G-Aligner

      Public
      G-Aligner: a graph-based feature alignment method for untargeted LC-MS-based metabolomics
      Python
      21700Updated Mar 9, 2024Mar 9, 2024
    • Metabolomics&Proteomics Injection Service for GC/LC-MS-based Experiment Design
      TypeScript
      Other
      1310Updated Nov 27, 2023Nov 27, 2023
    • 3D-MSNet

      Public
      A point cloud based deep learning model for untargeted feature detection and quantification in profile LC-HRMS data
      Python
      Other
      42810Updated Aug 28, 2023Aug 28, 2023
    • 0100Updated Aug 8, 2023Aug 8, 2023
    • MetaPro

      Public
      metabolomics data analysis platform
      12130Updated Apr 21, 2023Apr 21, 2023
    • m/z searcher for MS data
      TypeScript
      0000Updated Apr 5, 2023Apr 5, 2023
    • TypeScript
      Apache License 2.0
      0800Updated Feb 8, 2022Feb 8, 2022
    • cytoscape

      Public
      Cytoscape: an open source platform for network analysis and visualization
      Shell
      148000Updated Jan 24, 2022Jan 24, 2022
    • DIA data analysis for Proteomics
      Java
      Apache License 2.0
      0600Updated Dec 21, 2021Dec 21, 2021
    • EIC-GPU

      Public
      C++
      Other
      0300Updated Dec 14, 2020Dec 14, 2020
    • A C# port of the JavaFastPFOR library by Daniel Lemire
      C#
      Apache License 2.0
      12000Updated Jul 8, 2018Jul 8, 2018
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