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    15 repositories

    • d2n_ms

      Public
      Dosage-to-network manuscript repo
      Jupyter Notebook
      •
      Apache License 2.0
      •0•1•0•0•Updated Jan 6, 2026Jan 6, 2026

    • recalibrate

      Public
      R package for gene expression fold change recalibration
      R
      •
      Apache License 2.0
      •0•3•0•0•Updated Jul 4, 2025Jul 4, 2025

    • chip_seq_regulons

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Nov 17, 2024Nov 17, 2024

    • lorals

      Public
      Python
      •7•39•9•1•Updated Apr 25, 2023Apr 25, 2023

    • TF-eQTL

      Public
      HTML
      •1•1•0•0•Updated Feb 20, 2023Feb 20, 2023

    • loseq

      Public
      R
      •0•0•0•0•Updated Dec 22, 2022Dec 22, 2022

    • lorals_paper_code

      Public
      R
      •8•27•0•0•Updated May 8, 2022May 8, 2022

    • covid-crispr-eqtl

      Public
      eQTLs for CRISPR screen hit genes and colocalization analysis with COVID-19 GWAS in the 3p21.31 locus
      R
      •
      Apache License 2.0
      •0•5•0•0•Updated Feb 3, 2022Feb 3, 2022

    • containers

      Public
      Container images
      Shell
      •1•0•0•0•Updated Dec 14, 2021Dec 14, 2021

    • dottools

      Public
      R
      •
      Other
      •0•0•0•0•Updated Dec 14, 2021Dec 14, 2021

    • TF-eQTL_preprint

      Public
      R
      •0•2•0•0•Updated Jul 16, 2021Jul 16, 2021

    • spiromics-covid19-eqtl

      Public
      Mapping of cis-eQTLs for COVID-19-related genes in the SPIROMICS dataset
      R
      •
      Apache License 2.0
      •0•6•0•0•Updated Apr 21, 2021Apr 21, 2021

    • workflows

      Public
      Workflow description files for various pipelines
      WDL
      •0•0•0•0•Updated Jan 5, 2021Jan 5, 2021

    • edityper

      Public
      Python
      •
      MIT License
      •1•1•0•0•Updated Jul 28, 2020Jul 28, 2020

    • RNApipeline

      Public
      rna-seqpipelinerna-seq-pipeline
      rna-seqpipelinerna-seq-pipeline
      Shell
      •1•8•0•0•Updated Sep 26, 2019Sep 26, 2019
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