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    • anonymise

      Public
      A program to edit fields in a bam file
      Python
      Other
      1000Updated Mar 21, 2019Mar 21, 2019
    • h3agatk

      Public
      Common Workflow Language
      MIT License
      13000Updated Jan 8, 2019Jan 8, 2019
    • Generates a DNAnexus workflow that is broken (has a missing stage), for testing purposes
      Python
      0000Updated Aug 14, 2018Aug 14, 2018
    • cpipe

      Public
      The open source version of the Melbourne Genomics Health Alliance Exome Sequencing Pipeline
      Python
      Other
      1333273Updated Jan 20, 2018Jan 20, 2018
    • DNAnexus platform client libraries
      Python
      Apache License 2.0
      91000Updated Jul 18, 2017Jul 18, 2017
    • Adds or removes "chr" prefixes from a column of a CSV (e.g. GFF/BED files)
      Python
      GNU General Public License v3.0
      0000Updated Jun 23, 2017Jun 23, 2017
    • Joins two CSVs by an arbitrary index and calculates where they differ
      Python
      GNU General Public License v3.0
      1000Updated Jun 22, 2017Jun 22, 2017
    • A python 3 module for managing and installing assets from various sources
      Python
      GNU General Public License v3.0
      0000Updated May 3, 2017May 3, 2017
    • Groovy
      MIT License
      1000Updated Apr 5, 2017Apr 5, 2017
    • dx-vep

      Public
      A VEP (Ensembl Variant Effect Predictor) app for the DNA Nexus Platform
      Python
      GNU General Public License v3.0
      3100Updated Mar 9, 2017Mar 9, 2017
    • hg38 Vep Cache
      Makefile
      GNU General Public License v3.0
      0100Updated Mar 7, 2017Mar 7, 2017
    • UcscBed

      Public
      A bioinformatics library that provides a CLI and API for creating a BED file out of the UCSC refseq genes list
      Python
      GNU General Public License v3.0
      0000Updated Feb 20, 2017Feb 20, 2017
    • Bedtools asset for DNA Nexus
      Makefile
      GNU General Public License v3.0
      0100Updated Feb 17, 2017Feb 17, 2017
    • A collection of utilities for working with next generation (MPS) sequencing data in Groovy
      Groovy
      GNU Lesser General Public License v2.1
      9000Updated Jan 7, 2017Jan 7, 2017
    • iq

      Public
      QC generation system
      Python
      1000Updated Nov 18, 2016Nov 18, 2016
    • Finds overall gaps in multiple aligned samples
      Python
      1000Updated Nov 15, 2016Nov 15, 2016
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