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@RodriguezColmanLab Rodriguez Colman Lab

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    7 repositories

    • CellPhenTracker

      Public
      Set of OrganoidTracker plugins to measure and analyse fluorescent intensities.
      Python
      •0•0•0•0•Updated Apr 29, 2026Apr 29, 2026

    • Metaboglobe

      Public
      Plot KEGG pathways with highlighted fluxes/metabolites
      Python
      •0•0•0•0•Updated Apr 24, 2026Apr 24, 2026

    • NuclearIDTracker

      Public
      Predicts cell types based on nucleus features (morphology, neighborhood). Allows for observing cell types in mouse small intestinal organoid time lapses.
      Jupyter Notebook
      •0•0•0•0•Updated Mar 17, 2026Mar 17, 2026

    • CMMCells

      Public
      Game for the open day of the CMM Utrecht
      Game Maker Language
      •
      MIT License
      •0•0•0•0•Updated May 6, 2025May 6, 2025

    • napari-organoidtracker

      Public
      Allows you to read OrganoidTracker files into Napari
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Apr 24, 2025Apr 24, 2025

    • in_vitro_droplet_assay

      Public
      Python
      •
      MIT License
      •1•0•0•0•Updated Dec 13, 2023Dec 13, 2023

    • .github

      Public
      0•0•0•0•Updated Jan 25, 2023Jan 25, 2023
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