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    • eats-worm

      Public
      Jupyter Notebook
      MIT License
      61140Updated Mar 17, 2026Mar 17, 2026
    • npex

      Public
      NeuroPal EXtractor
      Python
      MIT License
      2100Updated Jan 6, 2026Jan 6, 2026
    • Pynwb extension to support mutlichannel volumetric imaging
      Jupyter Notebook
      BSD 3-Clause "New" or "Revised" License
      1000Updated Jan 6, 2026Jan 6, 2026
    • Small utility to generate reasonably high-quality MP4s from Leica software time-series.
      Scala
      Apache License 2.0
      1000Updated Nov 14, 2025Nov 14, 2025
    • Code accompanying Dunn et al. 2025 Curr Biol
      Jupyter Notebook
      0000Updated Oct 15, 2025Oct 15, 2025
    • SurfDist

      Public
      Python
      BSD 3-Clause "New" or "Revised" License
      0100Updated Sep 24, 2025Sep 24, 2025
    • BSD 3-Clause "New" or "Revised" License
      0000Updated Jul 11, 2025Jul 11, 2025
    • WormND

      Public
      Code for reproducing results and figures for WormND benchmark
      Jupyter Notebook
      2201Updated Feb 7, 2025Feb 7, 2025
    • Tutorials and examples of converting C. elegans optophysiology data to NWB data format
      Jupyter Notebook
      11320Updated Nov 4, 2024Nov 4, 2024
    • Code to evaluate and compare NeuroPAL images
      Jupyter Notebook
      0000Updated Jul 29, 2024Jul 29, 2024
    • Jupyter Notebook
      0050Updated Jul 29, 2024Jul 29, 2024
    • Website for storing access links to worm data and code repositories
      HTML
      0000Updated Mar 29, 2024Mar 29, 2024
    • Python
      MIT License
      0000Updated Jan 5, 2023Jan 5, 2023
    • qwiktiff

      Public
      Fast loading of large, multi-file tiff datasets
      Python
      0000Updated Jun 3, 2022Jun 3, 2022
    • analysis of worm locomotion
      Python
      0000Updated Jan 25, 2022Jan 25, 2022
    • minimo

      Public
      EJS
      MIT License
      2580Updated Nov 3, 2021Nov 3, 2021
    • mouse sleep state classification using EEG and EMG recordings
      Python
      MIT License
      1100Updated Jun 16, 2020Jun 16, 2020
    • code for ribo-gcamp project
      Jupyter Notebook
      0100Updated Jun 4, 2020Jun 4, 2020
    • goodplot

      Public
      templates for making good plots in python
      Jupyter Notebook
      0000Updated Jul 14, 2019Jul 14, 2019
    • C elegans connectomics
      MATLAB
      0200Updated Nov 24, 2014Nov 24, 2014
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