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    38 repositories

    • cellitac

      Public
      Reverse TF-Centric Modeling of Gene Regulation from scATAC-seq Data
      Jupyter Notebook
      •
      MIT License
      •0•2•0•0•Updated Feb 28, 2026Feb 28, 2026

    • brainroutedb

      Public
      Database for Predicting Blood-Brain Barrier-Permeable mTOR Inhibitors for Alzheimer’s Disease Using Machine Learning
      JavaScript
      •
      MIT License
      •0•1•0•0•Updated Feb 19, 2026Feb 19, 2026

    • brainroute

      Public
      Predicting Blood-Brain Barrier-Permeable mTOR Inhibitors for Alzheimer’s Disease Using Machine Learning
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Feb 10, 2026Feb 10, 2026

    • cancerag

      Public
      In-silico Exploration of Biased Agonists for Targeting High-yield Cancer Pathways
      Python
      •
      MIT License
      •1•0•0•0•Updated Feb 6, 2026Feb 6, 2026

    • mendelneuro

      Public
      Using Mendelian Randomization and Colocalization to Elucidate the Causal Relationship between Graves' diseases and Neurodenegrative diseases
      R
      •
      MIT License
      •1•0•0•0•Updated Dec 13, 2025Dec 13, 2025

    • marvpred

      Public
      Machine Learning and Molecular Dynamics Simulations Predict Potential Compounds against Marburg Virus
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Dec 4, 2025Dec 4, 2025

    • exvar

      Public
      exvar: an R Package for Gene Expression and Genetic Variation (SNPs , Indels, and CNVs) Data Analysis and Visualization
      R
      •
      Artistic License 2.0
      •5•5•0•0•Updated Nov 28, 2025Nov 28, 2025

    • rhinotypeR

      Public
      An R package for Rhinovirus Genotyping
      R
      •
      Other
      •1•4•0•0•Updated Nov 24, 2025Nov 24, 2025

    • emimr

      Public
      EMImR: a Shiny Application for Identifying Transcriptomic and Epigenomic Changes
      R
      •
      Artistic License 2.0
      •1•0•0•0•Updated Nov 12, 2025Nov 12, 2025

    • anticrcwu

      Public
      Deciphering Anti-Colorectal Cancer Mechanisms of Warburgia ugandensis: A Network Pharmacology, Bioinformatics, Molecular Docking, and Inflammatory Analysis
      MIT License
      •0•0•0•0•Updated Nov 9, 2025Nov 9, 2025

    • sars2drugml

      Public
      Integrated Machine Learning and Molecular Docking Studies to Identify SARS-CoV-2 Main Protease Inhibitors
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Nov 6, 2025Nov 6, 2025

    • kenyavirocat

      Public
      Development of a Kenyan Human Gut Virome Catalogue
      R
      •
      MIT License
      •0•0•0•0•Updated Oct 24, 2025Oct 24, 2025

    • autdb

      Public
      AutDB: A Privacy-First Cross-Dataset Baseline for Autism Spectrum Disorder Movement Analysis using MMASD and Engagnition
      Jupyter Notebook
      •
      MIT License
      •3•4•0•0•Updated Oct 22, 2025Oct 22, 2025

    • denguedrug

      Public
      Machine Learning and Molecular Docking Prediction of Potential Inhibitors against Dengue Virus
      Jupyter Notebook
      •
      MIT License
      •1•10•0•0•Updated Oct 2, 2025Oct 2, 2025

    • cidamr

      Public
      Causal Inference Analysis of the Effect of Beta-Amyloid and Tau Proteins on Dementia Risk: Mendelian Randomization Analysis
      MIT License
      •1•0•0•0•Updated Sep 24, 2025Sep 24, 2025

    • ml_sarscov2

      Public
      Machine Learning Approach for Predicting CoVID-19 Cases and Classifying SARS-CoV-2 Variants
      Jupyter Notebook
      •
      MIT License
      •1•0•2•0•Updated Aug 7, 2025Aug 7, 2025

    • reproteomics

      Public
      The reproducibility crisis in proteomics - a bioinformatics perspective
      Python
      •
      MIT License
      •1•1•0•0•Updated Jul 28, 2025Jul 28, 2025

    • rareinsight

      Public
      RareInsight: Developing a rare disease report generator for clinicians and patients
      R
      •
      MIT License
      •3•10•0•0•Updated Jun 16, 2025Jun 16, 2025

    • tbdrugml

      Public
      Predicting Lead Compounds against Mycobacterium Tuberculosis using Machine Learning and Molecular Docking
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Jun 7, 2025Jun 7, 2025

    • neurovar

      Public
      NeuroVar: A Genetic Expression and Variation data visualization tool for Neurological diseases’ biomarkers
      Python
      •
      Artistic License 2.0
      •3•2•0•0•Updated Apr 22, 2025Apr 22, 2025

    • epilepsy_var

      Public
      Integrated Analysis of Genetic Variation, Gene Expression and Methylation Changes in Epilepsy
      R
      •
      MIT License
      •2•3•0•0•Updated Dec 5, 2024Dec 5, 2024

    • prostruct

      Public
      ProStruct: A Python-based Tool for Homology Modeling and 3D Structure Prediction
      Python
      •
      MIT License
      •0•9•0•0•Updated Oct 31, 2024Oct 31, 2024

    • uhrf1cancer

      Public
      Uncovering DNA Methylation Signatures in Breast Cancer: An In-silico Approach
      HTML
      •
      MIT License
      •0•1•3•0•Updated Oct 29, 2024Oct 29, 2024

    • tgr5t2d

      Public
      Machine Learning and Molecular Dynamics Simulations Predict Potential TGR5 Agonists for Type 2 Diabetes Treatment
      Jupyter Notebook
      •
      MIT License
      •1•1•0•0•Updated Oct 14, 2024Oct 14, 2024

    • rshinyworkshop

      Public
      Workshop: Rshiny app development
      R
      •
      MIT License
      •2•2•0•0•Updated Jul 29, 2024Jul 29, 2024

    • gitworkshop

      Public
      A repository for GitHub class
      Shell
      •
      MIT License
      •16•4•1•1•Updated Jul 10, 2024Jul 10, 2024

    • hepadrug

      Public
      Drug Candidate Development against Non-alcoholic Steato Hepatitis
      Parrot
      •
      MIT License
      •0•1•0•0•Updated Jun 1, 2024Jun 1, 2024

    • capn10snp

      Public
      Uncovering Genetic Variations in the CAPN10 Gene: A Comprehensive SNP Analysis
      MIT License
      •0•1•0•0•Updated Apr 28, 2024Apr 28, 2024

    • aldosereduct2d

      Public
      Targeting Aldose Reductase as a Potential Therapeutic in Diabetes
      Python
      •
      MIT License
      •0•1•0•0•Updated Apr 23, 2024Apr 23, 2024

    • salmonellaml

      Public
      Predicting the Source of Salmonella Enterica: An Approach to Understanding Pathogen Surveilance
      Jupyter Notebook
      •
      MIT License
      •3•1•0•0•Updated Apr 21, 2024Apr 21, 2024