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    14 repositories

    • maveregistry-front-end

      Public
      MaveRegistry is a collaborative resource to catalyze collaboration, reduce redundant efforts, allow stakeholders to nominate targets, and enable tracking and sh…
      Vue
      •0•0•0•0•Updated Apr 21, 2026Apr 21, 2026

    • tileseq_mutcount

      Public
      Re-implement TileSeq mutation counts in python
      Python
      •
      MIT License
      •3•0•1•0•Updated Sep 9, 2024Sep 9, 2024

    • tileseqMave

      Public
      The RothLab TileSeq analysis pipeline for MAVE
      R
      •
      GNU General Public License v3.0
      •7•4•14•0•Updated Apr 1, 2024Apr 1, 2024

    • pacybara

      Public
      A pacbio barcode clustering and barseq pipeline
      bioinformaticspacbiodms
      bioinformaticspacbiodmsmavebarseq
      R
      •
      GNU General Public License v3.0
      •1•6•0•0•Updated Mar 27, 2024Mar 27, 2024

    • clusterUtil

      Public
      utility scripts for HPC cluster usage
      Shell
      •3•3•0•0•Updated Mar 1, 2024Mar 1, 2024

    • pacbioTools

      Public
      Shell
      •0•0•0•0•Updated Jul 10, 2023Jul 10, 2023

    • proteomeLLR

      Public
      LLR calculation for various variant effect predictors, proteome-wide
      Python
      •0•0•0•0•Updated May 1, 2023May 1, 2023

    • mavequest-front-end

      Public
      The frontend service of MaveQuest, a web resource to explore potential assays, phenotypes and clinical interests for human gene variants.
      Vue
      •0•1•0•0•Updated Apr 28, 2023Apr 28, 2023

    • variant-effect-predictor-assessment

      Public
      R
      •1•1•0•0•Updated Sep 15, 2022Sep 15, 2022

    • burden-test-public

      Public
      R
      •0•1•0•0•Updated Sep 15, 2022Sep 15, 2022

    • chromozoom

      Public
      ChromoZoom is a fast, fluid web-based genome browser
      JavaScript
      •
      GNU Affero General Public License v3.0
      •4•48•5•0•Updated Mar 15, 2021Mar 15, 2021

    • mave-gene-prioritization

      Public
      R script to 1) Extract missense variants that had been observed in "clinical testing" (as opposed to "literature only") in ClinVar. 2) Calculating movability an…
      dmsclinvarvariant-filtration
      dmsclinvarvariant-filtration
      R
      •0•4•0•0•Updated Oct 22, 2020Oct 22, 2020

    • tileseq_package

      Public
      DMS Tileseq sequence analysis pipeline
      Perl
      •0•1•1•0•Updated Apr 17, 2020Apr 17, 2020

    • pph2_and_rank

      Public
      Ranks genes according to PolyPhen2 scores for a list of mutations
      Python
      •
      MIT License
      •1•1•0•0•Updated Dec 10, 2011Dec 10, 2011
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