Repositories list

• claude-plugins

  Public
  Claude Code plugin marketplace for Whitehead Institute

  22 forks•00 stars•00 issues•11 pull request•Updated Apr 23, 2026Apr 23, 2026

• mit-wi-launch

  Public
  Website and wiki for the WI Launch initiative's slack community.

  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 8, 2026Apr 8, 2026

• weissmanlab

  Public
  Jupyter Notebook

  •22 forks•00 stars•00 issues•00 pull requests•Updated Apr 6, 2026Apr 6, 2026

• SunLab

  Public
  The Sun Lab will use this repository to release the code of our projects.

  00 forks•00 stars•00 issues•00 pull requests•Updated Mar 10, 2026Mar 10, 2026

• wibr-genome

  Public
  The Genome Technology Core provides sequencing infrastructure to enable genomic research. This github hosts pipelines, workflow frameworks, data management tool…

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 22, 2026Feb 22, 2026

• plaac

  Public
  Prion-Like Amino Acid Composition

  bioinformaticsproteinsprotein-sequences+ 4

  bioinformaticsproteinsprotein-sequenceshidden-markov-modelamino-acidsprediction-algorithmprion

  Java

  •

  MIT License

  •1010 forks•1818 stars•22 issues•00 pull requests•Updated Dec 15, 2025Dec 15, 2025

• TRAM-seq

  Public
  A nextflow pipeline for analyzing TRAM-seq (transcriptome-wide accessibility mapping by sequencing) data to quantify RNA structure and changes across different …

  Nextflow

  •11 fork•00 stars•00 issues•00 pull requests•Updated Nov 21, 2025Nov 21, 2025

• brieflow-visualization

  Public archive
  streamlit visualization of the brieflow pipeline results

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 14, 2025May 14, 2025

• statuspage

  Public
  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 1, 2025May 1, 2025

• humanrnamap

  Public
  Python

  •00 forks•11 star•00 issues•00 pull requests•Updated Apr 22, 2025Apr 22, 2025

• barc

  Public
  BaRC code for a variety of bioinformatics tasks, written by members of the Whitehead Institute Bioinformatics and Research Computing group.

  R

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jan 7, 2025Jan 7, 2025

• sirna

  Public
  Perl

  •

  MIT License

  •33 forks•11 star•11 issue•00 pull requests•Updated Nov 26, 2024Nov 26, 2024

• lobstr-code

  Public
  lobSTR: a short tandem repeat profiler for next generation sequencing data

  C++

  •

  GNU General Public License v3.0

  •1616 forks•44 stars•00 issues•00 pull requests•Updated Oct 31, 2013Oct 31, 2013