Skip to content

Pull requests: prody/ProDy

New pull request New
20 Open 1,365 Closed
20 Open 1,365 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

fix Python >= 3.12 syntax warnings
#2209 opened Jan 23, 2026 by samtomguns Loading…
1
Add torch option for linalg for NMA and transform
#2208 opened Jan 22, 2026 by jamesmkrieger • Draft
1
Rename constrained_anm module to generalized_anm Issue fix
#2201 opened Jan 5, 2026 by Copilot AI • Draft
@AnthonyBogetti
2
fixed issue with InSty multiprocessing on Windows and MacOS Issue fix
#2200 opened Jan 2, 2026 by AnthonyBogetti Loading…
1
@AnthonyBogetti
Add proper error handling for missing required fields in mmCIF parser Issue fix
#2198 opened Dec 15, 2025 by Copilot AI • Draft
1
@AnthonyBogetti
Fix AttributeError in calcHydrophobic from nested select() call Issue fix
#2197 opened Dec 15, 2025 by Copilot AI • Draft
1
@AnthonyBogetti
Incorporating DruGUI into ProDy New feature
#2171 opened Aug 21, 2025 by Cventura18 Loading…
@AnthonyBogetti
29
Write mmcif header Issue fix
#2137 opened Jun 10, 2025 by jamesmkrieger Loading…
@AnthonyBogetti
3
add wwpdb ftp and http Issue fix
#2127 opened May 8, 2025 by jamesmkrieger Loading…
@AnthonyBogetti
1
Fix parseMMCIF and fetchPDB to get CIF files Issue fix
#2126 opened May 8, 2025 by jamesmkrieger Loading…
@AnthonyBogetti
4
CaviTracer tool for detecting channels, tunnels, pores Future
#2018 opened Dec 18, 2024 by karolamik13 Loading…
@vbadwaj
20
add hierview numChains etc to general atomic Future
#1922 opened Jul 28, 2024 by jamesmkrieger • Draft
1
various fixes for handling ensembles with selections as ref Future
#1807 opened Dec 18, 2023 by jamesmkrieger Loading…
@AnthonyBogetti
3
WIP: Motif search Future
#1549 opened May 13, 2022 by mkonstanty • Draft
@AnthonyBogetti
13
deprecation prep Future
#1399 opened Aug 1, 2021 by jamesmkrieger • Draft
@AnthonyBogetti
7
added trajectory wrap method Future
#1344 opened Mar 11, 2021 by jamesmkrieger Loading…
31
New Hybrid Modules Future
#1309 opened Feb 16, 2021 by jamesmkrieger • Draft
@AnthonyBogetti
6
charmm-gui interface Future
#1226 opened Dec 22, 2020 by jamesmkrieger • Draft
1
Chain alignment fixes Future
#1220 opened Dec 21, 2020 by jamesmkrieger • Draft
1
bug fix on color handling for showProjection Future
#1070 opened Jun 10, 2020 by jamesmkrieger • Draft
28
ProTip! Mix and match filters to narrow down what you’re looking for.