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Preserve category decoder analysis update - #30

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rojasgabriel wants to merge 10 commits into
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agent/preserve-category-decoder-work
Draft

Preserve category decoder analysis update#30
rojasgabriel wants to merge 10 commits into
mainfrom
agent/preserve-category-decoder-work

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@rojasgabriel

@rojasgabriel rojasgabriel commented Jul 21, 2026

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What this preserves

  • the category-choice decoder analysis update and generated HTML report
  • repository-wide scientific analysis conventions
  • the existing branch history for category decoding and trial alignment

Validation observed during preservation

  • Ruff lint passed
  • Ruff formatting passed after one mechanical formatting correction
  • pinned ty==0.0.37 reports 9 diagnostics in the notebook and decoder script
  • this branch intentionally removes the earlier generated unit tests, so pytest collects no tests

The PowerPoint presentation and its transient lock file are not included.

@socket-security

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Review the following changes in direct dependencies. Learn more about Socket for GitHub.

Diff Package Supply Chain
Security
Vulnerability Quality Maintenance License
Updatedsetuptools@​81.0.0 ⏵ 83.0.073100 +210010070

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