Replace scv.pl.scatter and scvelo paga with scanpy equivalents#1302

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Marius1311 merged 33 commits intomainfrom

scvelo/replace-scatter-paga

Mar 9, 2026

Commits on Feb 24, 2026

Replace scv.pl.scatter and scvelo.plotting.paga with scanpy equivalents
Marius1311
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Address PR review: move helpers, drop perc, add outline, document transitions_confidence
Marius1311
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Fix CI: handle save/show ourselves instead of delegating to scanpy
Marius1311
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Remove scVelo references from tests, rename ground truth files
Marius1311
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Add scVelo as a test dependency
Marius1311
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Regenerate random walk ground truth after PR 1 rebase
Marius1311
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Remove from __future__ import annotations from PR 1 files
Marius1311
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Commits on Feb 26, 2026

Commits on Mar 2, 2026

Commits on Mar 3, 2026

Commits on Mar 9, 2026