Minimal packaging draft

.gitignore

@@ -0,0 +1,2 @@
+*.pyc
+*.egg-info

pyproject.toml

@@ -0,0 +1,54 @@
+[build-system]
+requires = ["setuptools"]
+build-backend = "setuptools.build_meta"
+
+[project]
+name = "sidescantools"
+version = "0.0"
+dependencies = [
+    "geopy",
+    "napari[all]",
+    "numpy",
+    "Pillow",
+    "pyxtf",
+    "scipy",
+    "scikit-image",
+    "utm",
+    "GDAL",
+]
+requires-python = ">=3.11"
+authors = [
+  {name = "NN", email = "NN@example.com"},
+  {name = "MM", email = "MM@example.com"},
+]
+maintainers = [
+  {name = "NN", email = "NN@example.com"},
+  {name = "MM", email = "MM@example.com"},
+]
+description = "Sidescan Tools"
+readme = "README.md"
+license = "GPL-3.0-or-later"
+license-files = ["LICEN[CS]E*"]
+keywords = ["sidescan", "tools"]
+classifiers = [
+  "Development Status :: 4 - Beta",
+  "Programming Language :: Python"
+]
+
+[project.optional-dependencies]
+gui = ["QtPy"]
+cli = [
+]
+
+[project.urls]
+Homepage = "https://example.com"
+Documentation = "https://readthedocs.org"
+Repository = "https://github.com/sonoware/sidescantools.git"
+"Bug Tracker" = "https://github.com/sonoware/sidescantools/issues"
+Changelog = "https://github.com/sonoware/sidescantools/commits/main"
+
+# [project.scripts]
+# sidescantools-cli = "sidescantools.main:main_cli"
+
+[project.gui-scripts]
+sidescantools-gui = "sidescantools.main:main"

bottom_detection_napari_ui.py → src/sidescantools/bottom_detection_napari_ui.py

@@ -1,9 +1,9 @@
 import napari
 from magicgui import magicgui
 from pathlib import Path
-from sidescan_preproc import SidescanPreprocessor
+from .sidescan_preproc import SidescanPreprocessor
 import numpy as np
-from sidescan_file import SidescanFile
+from .sidescan_file import SidescanFile
 import os
 
 def run_napari_btm_line(

egn_building_batch.py → src/sidescantools/egn_building_batch.py

@@ -1,7 +1,7 @@
 import pathlib
-from sidescan_preproc import SidescanPreprocessor
+from .sidescan_preproc import SidescanPreprocessor
 import numpy as np
-from sidescan_file import SidescanFile
+from .sidescan_file import SidescanFile
 import multiprocessing
 from itertools import repeat
 

main.py → src/sidescantools/main.py

@@ -25,15 +25,15 @@
 import qtpy.QtCore as QtCore
 import qtpy.QtGui as QtGui
 import sys, os, pathlib
-from bottom_detection_napari_ui import run_napari_btm_line
-from egn_building_batch import generate_slant_and_egn_files
-from sidescan_georeferencer import SidescanGeoreferencer
+from .bottom_detection_napari_ui import run_napari_btm_line
+from .egn_building_batch import generate_slant_and_egn_files
+from .sidescan_georeferencer import SidescanGeoreferencer
 import yaml
 from math import log
 import multiprocessing
 import numpy as np
-from sidescan_preproc import SidescanPreprocessor
-from sidescan_file import SidescanFile
+from .sidescan_preproc import SidescanPreprocessor
+from .sidescan_file import SidescanFile
 import napari
 from napari.utils.colormaps import Colormap
 

sidescan_file.py → src/sidescantools/sidescan_file.py

@@ -1,7 +1,7 @@
 import numpy as np
-from xtf_wrapper import XTFWrapper
+from .xtf_wrapper import XTFWrapper
 import pyxtf
-from jsf import JSFFile, JSFSystemInformation, JSFSonarDataPacket
+from .jsf import JSFFile, JSFSystemInformation, JSFSonarDataPacket
 import os
 from pathlib import Path
 from datetime import datetime

sidescan_georeferencer.py → src/sidescantools/sidescan_georeferencer.py

@@ -5,7 +5,7 @@
 import numpy as np
 import utm
 import math
-from sidescan_file import SidescanFile
+from .sidescan_file import SidescanFile
 import subprocess
 import itertools
 from PIL import Image

sidescan_preproc.py → src/sidescantools/sidescan_preproc.py

@@ -1,7 +1,7 @@
 import numpy as np
 import copy
 import scipy.signal as scisig
-from sidescan_file import SidescanFile
+from .sidescan_file import SidescanFile
 from skimage.morphology.misc import remove_small_holes, remove_small_objects
 import skimage
 from skimage import feature