Lab website for the Girke Lab at the University of California, Riverside.
Live site: https://girke.bioinformatics.ucr.edu/
The Girke lab focuses on fundamental research questions at the intersection of genome biology and chemical genomics, including:
- Computational methods for large-scale omics and small molecule bioactivity data
- Gene expression signature searching and functional enrichment analysis
- Workflow software for NGS data analysis
- Cheminformatics and compound-target interaction analysis
- Spatial transcriptomics and single-cell genomics
Software packages are distributed through R/Bioconductor and GitHub.
- Biography — Research background and CV
- Members — Current and former lab members
- Publications — Publication list
- Software — R/Bioconductor packages
- Teaching — Courses and tutorials
- Positions — Open positions
Thomas Girke
Department of Botany and Plant Sciences
University of California, Riverside
https://girke.bioinformatics.ucr.edu/people/contact/
- Quarto — Scientific publishing system
- GitHub Pages — Hosting
For site administration instructions see ADMIN.md.