Ngee arctic im4/pft physiology#2
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Comments out code changes for layers below last soil layer, i.e. bedrock layers. This will fix 2 previous variable soil thickness test failures.
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…machine with limited input data, but NOT YET fully work. Two tests are actually similary as 'elm_usrdat' test, but with 42_FLUXNETSITES and a few physiology parameters, based on Sulman et al. (2021).One of them is a short run to test codes, while another is a long run for bug-fixing heavy winter snow caused issue in arctic pft phenology. Those tests won't change simulation results until new codes and parameters are pull in.
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| !if (use_var_soil_thick .and. lev > nlevbed) then | ||
| ! this causes 2 'vst' tests failed, although it's a more reasonble fix | ||
| ! this%watsat_col(c,lev) = 0.01_r8 ! very small value for porosity of bedrock | ||
| ! xksat = 1.e-20_r8 ! cannot be zero (used below as denominator) | ||
| !endif | ||
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…w a designated value
…y PFT. Now column N fixation is calculated as a weighted average over PFTs.
Add rhizome turnover
…w a designated value (modified approach)
… snow winter, snow-melt may last past the summer solstice. This likely causes no PFT onset stage even when a short non-snow season occurs. Add a flag for switching plant growth onset gdd summation end option in phenology. The switch is for extending onset stage up to start of offset in Fall, rather than to summer solstice by default.
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Addresses minor cleaning edits following second round of review
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…eplace hard coded cycle (thorntonpe#2)
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I'm closing this PR, since it's re-assigned to another repository. |
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PFT physiological changes on top of PFT stuff