tolkit
Tree of Life Kit
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Showing 10 of 28 repositories
- fw_regions Public
Detects low-complexity genomic regions (centromeres, telomeres, satellite arrays) in genome assemblies by applying PELT changepoint detection to the rolling variance of Shannon entropy and CTW signals computed by fasta_windows.
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- aa2nucaln Public
Amino acid to nucleotide alignment, as per this paper: https://academic.oup.com/bioinformatics/article/31/11/1836/2365396
- vscan Public
- nemADSQ Public
A repository containing pipelines for nematode genome assembly, decontamination, scaffolding, and QC
- containerize-conda Public Forked from grst/containerize-conda
Turn an existing conda environment into a Singularity container
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