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@Victorian-Bioinformatics-Consortium @pha4ge

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  1. prokka prokka Public

    ⚡ ♒ Rapid prokaryotic genome annotation

    Perl 951 235

  2. snippy snippy Public

    ✂️ ⚡ Rapid haploid variant calling and core genome alignment

    Perl 561 118

  3. shovill shovill Public

    ♠️ Assemble bacterial isolate genomes from Illumina paired-end reads

    Perl 250 46

  4. abricate abricate Public

    🔎 💊 Mass screening of contigs for antimicrobial and virulence genes

    Perl 468 103

  5. mlst mlst Public

    🆔 Scan contig files against PubMLST typing schemes

    Perl 262 55

  6. barrnap barrnap Public

    🔬 ♌ Bacterial ribosomal RNA predictor

    Perl 273 45