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Long Read Abundances and Unbinned

Status: Open.

#278 In wwood/CoverM;

· ttubb opened on Oct 17, 2025

CoverM Dereplication: Why Do .tsv Outputs Differ from cluster_definition.tsv?

Status: Open.

#273 In wwood/CoverM;

· sarehaghababaee opened on Sep 3, 2025

Any plan to support X-Mapper as an option for aligner?

Status: Open.

#271 In wwood/CoverM;

· ilnamkang opened on Sep 2, 2025

Guidance on CoverM vs dRep Dereplication Outputs

Status: Open.

#269 In wwood/CoverM;

· sarehaghababaee opened on Aug 25, 2025

Why Read Count is zero, but Covered Bases is not zero?

Status: Open.

#265 In wwood/CoverM;

· jiaojiaoguan opened on Aug 7, 2025

Can CoverM contig be run in batches?

Status: Open.

#264 In wwood/CoverM;

· try-hunter opened on Aug 3, 2025

Relative abundance of unmapped is negative

Status: Open.

#256 In wwood/CoverM;

· LukCR opened on Jun 30, 2025

mutiple align reads and align parameter question question

Status: Open.

#255 In wwood/CoverM;

· Sung-hub opened on Jun 5, 2025

accumulated coverage across multiple samples

Status: Open.

#254 In wwood/CoverM;

· jianshu93 opened on May 29, 2025

0 read mapped with coverm genome relative abundance calculation.

Status: Open.

#252 In wwood/CoverM;

· Sung-hub opened on May 6, 2025

Could not find an available minimap2 executable.

Status: Open.

#246 In wwood/CoverM;

· Sung-hub opened on Mar 31, 2025

--contig-end-exclusion feature request

Status: Open.

#238 In wwood/CoverM;

· jianshu93 opened on Feb 15, 2025