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possible overcommit

Status: Open.

#31 In zanglab/SICER2;

· EricDeveaud opened on Feb 26, 2025

How do I use call peak with samples with duplicates?

Status: Open.

#30 In zanglab/SICER2;

· anyang-kevin opened on Apr 22, 2024

bedtools bam2bed race condition

Status: Open.

#29 In zanglab/SICER2;

· skchronicles opened on Apr 18, 2024

Keeping low number of PCR duplicates

Status: Open.

#28 In zanglab/SICER2;

· phoebe460 opened on Apr 13, 2024

Why are species and their chromosomes hardcoded ?

Status: Open.

#23 In zanglab/SICER2;

· vidal-adrien opened on Oct 4, 2023

Release tag for v1.0.3

Status: Open.

#22 In zanglab/SICER2;

· apregier opened on Jun 27, 2023

ValueError: math domain error

Status: Open.

#21 In zanglab/SICER2;

· MingLi-929 opened on Feb 1, 2023

TypeError: can only concatenate str (not "numpy.int32") to str

Status: Open.

#20 In zanglab/SICER2;

· jaudall opened on Jan 31, 2023

How to change the treatment_file-W200-G600-islands-summary file to the standard bed file format?

Status: Open.

#19 In zanglab/SICER2;

· danli349 opened on Jan 29, 2023

IndexError while "Determining the score threshold from random background..."

Status: Open.

#18 In zanglab/SICER2;

· arhickman opened on Aug 8, 2022

suggestion to raise a warning for genome assembly version difference UCSC/ENSEMBL

Status: Open.

#16 In zanglab/SICER2;

· FatihSarigol opened on Jun 9, 2022

Species info for custom genome.

Status: Open.

#14 In zanglab/SICER2;

· crowja opened on Nov 22, 2021