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Pull requests: kordk/torch-ecpg

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Pull requests list

Seed reservoir sampling from the run seed
#370 opened Aug 11, 2026 by kordk Owner Loading…
1
Add --max-fdr export filter; use FDR-significant catalog as network universe
#369 opened Aug 11, 2026 by kordk Owner Loading…
1
Repair three guards in the se-ratio trend report tests
#356 opened Aug 3, 2026 by kordk Owner Loading…
1
Add per-region se-ratio trend diagnostic
#352 opened Aug 2, 2026 by kordk Owner Loading…
1
Read-only Evaluation of tecpg Correctness Harness
#302 opened Jul 14, 2026 by kordk Owner Loading…
1
Update setuptools requirement from >=63.3.0 to >=83.0.0 dependencies Pull requests that update a dependency file python Pull requests that update python code
#284 opened Jul 6, 2026 by dependabot Bot Loading…
Update click requirement from >=8.0.3 to >=8.4.2 dependencies Pull requests that update a dependency file python Pull requests that update python code
#283 opened Jun 29, 2026 by dependabot Bot Loading…
Refactor: fix renaming and test issues
#270 opened Jun 25, 2026 by kordk Owner Loading…
1
Refactor: hard rename lstsq to qr and manual to legacy_normal_eq
#269 opened Jun 25, 2026 by kordk Owner Loading…
1
Update matplotlib requirement from >=3.5.1 to >=3.10.9 dependencies Pull requests that update a dependency file python Pull requests that update python code
#250 opened May 29, 2026 by dependabot Bot Loading…
Update requests requirement from >=2.26.0 to >=2.34.2 dependencies Pull requests that update a dependency file python Pull requests that update python code
#249 opened May 29, 2026 by dependabot Bot Loading…
Update numpy requirement from >=1.24.1 to >=2.2.6 dependencies Pull requests that update a dependency file python Pull requests that update python code
#248 opened May 29, 2026 by dependabot Bot Loading…
Update scipy requirement from >=1.10.0 to >=1.15.3 dependencies Pull requests that update a dependency file python Pull requests that update python code
#247 opened May 29, 2026 by dependabot Bot Loading…
Update colorama requirement from >=0.4.4 to >=0.4.6 dependencies Pull requests that update a dependency file python Pull requests that update python code
#246 opened May 29, 2026 by dependabot Bot Loading…
Update pandas requirement from >=1.3.5 to >=2.3.3 dependencies Pull requests that update a dependency file python Pull requests that update python code
#245 opened May 29, 2026 by dependabot Bot Loading…
Update psutil requirement from >=5.9.4 to >=7.2.2 dependencies Pull requests that update a dependency file python Pull requests that update python code
#243 opened May 29, 2026 by dependabot Bot Loading…
Investigate UCSC WG-6 track for unmapped HT-12 probe recovery
#235 opened May 29, 2026 by kordk Owner Loading…
2
docs: add LMM Evaluation and Implementation Strategy
#176 opened May 3, 2026 by kordk Owner Loading…
1
Fix assignRegionToEcpg_parquet.py: 100% trans output due to chr mismatch, broken negative-strand logic, and missing ID normalization
#96 opened Mar 9, 2026 by Copilot AI • Draft
@kordk
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